Translate SummarizedExperiment with annotation package

Source: R/se_wrappers.R

Translate SummarizedExperiment with annotation package

translateSEWithDb(se, db, sourceKey, targetKey, summariseFun)

Arguments

se

The SummarizedExperiment object that contains the matrix to be translated.
db

Annotation package object to use for the translation.
sourceKey

Source key in the DB.
targetKey

Target key in the DB.
summariseFun

Function used to resolve multi-mapping situations.

Value

The translated version of the summarized experiment.