Perform the default limma analysis given a data matrix, a sample information data frame and a grouping column.
autoLimmaComparison(mat, sampInfo, groupCol, removeColName = TRUE, ...)
| mat | Matrix with data to analyse. |
|---|---|
| sampInfo | sampInfo The sample information data frame. |
| groupCol | groupCol The column containing the grouping variable |
| removeColName | Remove column name from design matrix? |
| ... | Other arguments passed to limmaDfFromContrasts. |
A data frame with the results in a tidy format.